SoImageStackProjectionProcessing3d engine More...
#include <ImageViz/Engines/ImageManipulation/StackOperations/SoImageStackProjectionProcessing3d.h>
Public Types | |
enum | ProjectionMode { INTENSITY_MAXIMA = 0 , GRADIENT_MAXIMA = 1 , PROJECTION = 2 , INTENSITY_MINIMA = 3 , MEDIAN = 4 , MEAN = 5 , VARIANCE = 6 , ENTROPY = 7 , ENERGY = 8 } |
enum | GradientOperator { GAUSSIAN_GRADIENT = 0 , MORPHOLOGICAL_GRADIENT = 1 , RECURSIVE_GRADIENT = 2 } |
Public Types inherited from SoImageVizEngine | |
enum | ComputeMode { MODE_2D = 0 , MODE_3D = 1 , MODE_AUTO = 2 } |
Compute Mode This enum specifies whether the main input will be interpreted as a 3D volume or a stack of 2D images for processing. More... | |
enum | Neighborhood3d { CONNECTIVITY_6 = 0 , CONNECTIVITY_18 = 1 , CONNECTIVITY_26 = 2 } |
Neighborhood Connectivity 3D. More... | |
Public Member Functions | |
SoImageStackProjectionProcessing3d () | |
Constructor. | |
Public Member Functions inherited from SoImageVizEngine | |
virtual SoType | getTypeId () const |
Returns the type identifier for this specific instance. | |
virtual void | startEvaluate () |
Evaluate engine and dependencies in another thread without blocking the current one. | |
virtual void | waitEvaluate () |
Wait for the end of engine evaluation. | |
virtual void | abortEvaluate () |
Abort current processing as soon as possible. | |
virtual bool | isEvaluating () |
Returns true if the engine evaluation is in progress. | |
Public Member Functions inherited from SoEngine | |
virtual int | getOutputs (SoEngineOutputList &list) const |
Returns a list of outputs in this engine. | |
SoEngineOutput * | getOutput (const SbName &outputName) const |
Returns a reference to the engine output with the given name. | |
SbBool | getOutputName (const SoEngineOutput *output, SbName &outputName) const |
Returns (in outputName) the name of the engine output (output). | |
SoEngine * | copy () const |
Creates and returns an exact copy of the engine. | |
Public Member Functions inherited from SoFieldContainer | |
void | setToDefaults () |
Sets all fields in this object to their default values. | |
SbBool | hasDefaultValues () const |
Returns TRUE if all of the object's fields have their default values. | |
SbBool | fieldsAreEqual (const SoFieldContainer *fc) const |
Returns TRUE if this object's fields are exactly equal to fc's fields. | |
void | copyFieldValues (const SoFieldContainer *fc, SbBool copyConnections=FALSE) |
Copies the contents of fc's fields into this object's fields. | |
SoNONUNICODE SbBool | set (const char *fieldDataString) |
Sets one or more fields in this object to the values specified in the given string, which should be a string in the Open Inventor file format. | |
SbBool | set (const SbString &fieldDataString) |
Sets one or more fields in this object to the values specified in the given string, which should be a string in the Open Inventor file format. | |
void | get (SbString &fieldDataString) |
Returns the values of the fields of this object in the Open Inventor ASCII file format in the given string. | |
virtual int | getFields (SoFieldList &list) const |
Appends references to all of this object's fields to resultList, and returns the number of fields appended. | |
virtual int | getAllFields (SoFieldList &list) const |
Returns a list of fields, including the eventIn's and eventOut's. | |
virtual SoField * | getField (const SbName &fieldName) const |
Returns a the field of this object whose name is fieldName. | |
virtual SoField * | getEventIn (const SbName &fieldName) const |
Returns a the eventIn with the given name. | |
virtual SoField * | getEventOut (const SbName &fieldName) const |
Returns the eventOut with the given name. | |
SbBool | getFieldName (const SoField *field, SbName &fieldName) const |
Returns the name of the given field in the fieldName argument. | |
SbBool | enableNotify (SbBool flag) |
Notification at this Field Container is enabled (if flag == TRUE) or disabled (if flag == FALSE). | |
SbBool | isNotifyEnabled () const |
Notification is the process of telling interested objects that this object has changed. | |
virtual void | setUserData (void *data) |
Sets application data. | |
void * | getUserData (void) const |
Gets user application data. | |
Public Member Functions inherited from SoBase | |
virtual void | touch () |
Marks an instance as modified, simulating a change to it. | |
virtual SbName | getName () const |
Returns the name of an instance. | |
virtual void | setName (const SbName &name) |
Sets the name of an instance. | |
void | setSynchronizable (const bool b) |
Sets this to be a ScaleViz synchronizable object. | |
bool | isSynchronizable () const |
Gets the ScaleViz synchronizable state of this object. | |
Public Member Functions inherited from SoRefCounter | |
void | ref () const |
Adds a reference to an instance. | |
void | unref () const |
Removes a reference from an instance. | |
void | unrefNoDelete () const |
unrefNoDelete() should be called when it is desired to decrement the reference count, but not delete the instance if this brings the reference count to zero. | |
int | getRefCount () const |
Returns current reference count. | |
void | lock () const |
lock this instance. | |
void | unlock () const |
unlock this instance. | |
Public Member Functions inherited from SoTypedObject | |
SbBool | isOfType (const SoType &type) const |
Returns TRUE if this object is of the type specified in type or is derived from that type. | |
template<typename TypedObjectClass > | |
SbBool | isOfType () const |
Returns TRUE if this object is of the type of class TypedObjectClass or is derived from that class. | |
Public Attributes | |
SoSFImageDataAdapter | inImage |
A 3d volume representing a stack of 2d images. | |
SoSFEnum | projectionMode |
The type of process. | |
SoSFInt32 | smoothingSize |
The size for the smooth process. | |
SoSFEnum | gradientOperator |
The type of process. | |
SoImageVizEngineOutput< SoSFImageDataAdapter, SoImageDataAdapter * > | outImage |
The output image. | |
SoImageVizEngineOutput< SoSFImageDataAdapter, SoImageDataAdapter * > | outLabelImage |
The output map label image. | |
Public Attributes inherited from SoImageVizEngine | |
SbEventHandler< EventArg & > | onBegin |
Event raised when the processing begins. | |
SbEventHandler< EventArg & > | onEnd |
Event raised when processing ends and the result is available. | |
SbEventHandler< EventArg & > | onProgress |
Event raised while processing is running. | |
Additional Inherited Members | |
Static Public Member Functions inherited from SoImageVizEngine | |
static SoType | getClassTypeId () |
Returns the type identifier for this class. | |
Static Public Member Functions inherited from SoEngine | |
static SoType | getClassTypeId () |
Returns the type identifier for the SoEngine class. | |
static SoEngine * | getByName (const SbName &name) |
Looks up engine(s) by name. | |
static int | getByName (const SbName &name, SoEngineList &list) |
Looks up engine(s) by name. | |
Static Public Member Functions inherited from SoFieldContainer | |
static SoType | getClassTypeId () |
Returns the type of this class. | |
Static Public Member Functions inherited from SoBase | |
static SoType | getClassTypeId () |
Returns type identifier for this class. | |
Static Public Member Functions inherited from SoTypedObject | |
static SoType | getClassTypeId () |
Returns the type identifier for this class. | |
SoImageStackProjectionProcessing3d engine
The SoImageStackProjectionProcessing3d engine creates a single image containing selected pixels from a stack of input images.
For example, when you make several acquisitions of the same object with different acquisition conditions, the images you get may not have the same focused areas. The SoImageStackProjectionProcessing3d engine examines all the images to get the best values of the sequence and build the resulting image.
When projectionMode is one of INTENSITY_MAXIMA, GRADIENT_MAXIMA or INTENSITY_MINIMA, the engine also generates an outLabelImage that shows the contribution source (i.e. the sequence number of the image from the input stack) on the result image outImage.
This engine can produce higher quality results than using the standard Maximum/Minimum Intensity Projection (MIP) rendering in VolumeViz.
For color images, it works in the HSL color space and uses only the lightness.
SoGradientOperatorProcessing2d
inImage | NULL |
projectionMode | GRADIENT_MAXIMA |
smoothingSize | 5 |
gradientOperator | MORPHOLOGICAL_GRADIENT |
Definition at line 76 of file SoImageStackProjectionProcessing3d.h.
Enumerator | |
---|---|
GAUSSIAN_GRADIENT | Compute a gaussian gradient (convolution with derivatives of gaussian function along the stack direction). |
MORPHOLOGICAL_GRADIENT | Compute a morphological gradient (see SoMorphologicalGradientProcessing for definition). |
RECURSIVE_GRADIENT | Compute a recursive gradient (Canny-Deriche on stack direction). |
Definition at line 146 of file SoImageStackProjectionProcessing3d.h.
Enumerator | |
---|---|
INTENSITY_MAXIMA | Select the pixel with the highest value of the sequence. |
GRADIENT_MAXIMA | Select the pixel with the highest gradient. This mode enables the gradientOperator field. |
PROJECTION | Sum all values of the sequence. |
INTENSITY_MINIMA | Select the pixel with the lowest value of the sequence. |
MEDIAN | Select the pixel which is the median of the sequence. |
MEAN | Compute the average of the sequence. |
VARIANCE | Compute the variance of the sequence. |
ENTROPY | Compute the entropy of the sequence based on this formula:
where is the probability to have a pixel with value (it's the number of those pixels divided by the total number of pixels). |
ENERGY | Compute the energy of the sequence based on this formula:
|
Definition at line 91 of file SoImageStackProjectionProcessing3d.h.
SoImageStackProjectionProcessing3d::SoImageStackProjectionProcessing3d | ( | ) |
Constructor.
SoSFEnum SoImageStackProjectionProcessing3d::gradientOperator |
The type of process.
Use enum GradientOperator. Default is MORPHOLOGICAL_GRADIENT
Definition at line 164 of file SoImageStackProjectionProcessing3d.h.
SoSFImageDataAdapter SoImageStackProjectionProcessing3d::inImage |
A 3d volume representing a stack of 2d images.
Default value is NULL. Supported types include: grayscale binary label image.
Definition at line 86 of file SoImageStackProjectionProcessing3d.h.
SoImageVizEngineOutput<SoSFImageDataAdapter,SoImageDataAdapter*> SoImageStackProjectionProcessing3d::outImage |
The output image.
Default value is NULL. Supported types include: grayscale binary label color image.
Definition at line 167 of file SoImageStackProjectionProcessing3d.h.
SoImageVizEngineOutput<SoSFImageDataAdapter,SoImageDataAdapter*> SoImageStackProjectionProcessing3d::outLabelImage |
The output map label image.
Each label represents the z plane used in output image. Default value is NULL. Supported types include: label image.
Definition at line 170 of file SoImageStackProjectionProcessing3d.h.
SoSFEnum SoImageStackProjectionProcessing3d::projectionMode |
The type of process.
Use enum ProjectionMode. Default is GRADIENT_MAXIMA
Definition at line 137 of file SoImageStackProjectionProcessing3d.h.
SoSFInt32 SoImageStackProjectionProcessing3d::smoothingSize |
The size for the smooth process.
Default value is 5.
Definition at line 141 of file SoImageStackProjectionProcessing3d.h.